RNA-seq (bulk)
Splice-aware alignment, DESeq2 differential expression, GSEA, TF activity inference.
- Up to
- 24 samples
- Turnaround
- 7 business days
- • Adapter trimming + QC (fastp + MultiQC)
- • Splice-aware alignment + gene quantification
- • DESeq2 differential expression with shrinkage
- • PCA, volcano plot, heatmap of top DEGs
- • GSEA: GO, KEGG, Reactome
- • TF activity inference (DoRothEA / decoupleR)